Introduction | Tutorial | Installation | epTypes: explore enviPath database structure | epLogin: log into an enviPath personal account | epList: retrieve lists of objects from enviPath | epLink: map between different types of objects | epGet: fetch raw objects from enviPath | epModel: predict compound biotransformation pathways | epLogout: log out of an enviPath personal account | Reproducibility | Cite enviPathR | Session info

Introduction | Motivation | Panels | Compositional Analysis | Ordination Analysis | Structural Analysis | Other Panels | Tutorial | Installation | Example | Resources | Open datasets | Other tutorials | Citation | Acknowledgements | Help | Reproducibility | References

Introduction | Compositional Analysis | Abundance plot | Abundance density plot | Prevalence plot | Feature assay plot | Complex heatmap plot | Ordination Analysis | RDA plot | Scree plot | Loading plot | Reduced dimension plot | Structural Analysis | Row/Column tree plots | Row/Column graph plots | Other panels | Row/Column tile plots | Mediation plot | Row/Column data tables | Row/Column data plots | Reproducibility | References

Introduction | Motivation | Interface | Tutorial | Installation | Example | Resources | Citation | Background Knowledge | Help | Reproducibility | References